Package: Temporal 0.3.0.1

Temporal: Parametric Time to Event Analysis

Performs maximum likelihood based estimation and inference on time to event data, possibly subject to non-informative right censoring. FitParaSurv() provides maximum likelihood estimates of model parameters and distributional characteristics, including the mean, median, variance, and restricted mean. CompParaSurv() compares the mean, median, and restricted mean survival experiences of two treatment groups. Candidate distributions include the exponential, gamma, generalized gamma, log-normal, and Weibull.

Authors:Zachary McCaw [aut, cre]

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Temporal/json (API)

# Install 'Temporal' in R:
install.packages('Temporal', repos = c('https://zrmacc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/zrmacc/temporal/issues

On CRAN:

7 exports 3 stars 2.19 score 23 dependencies 1 dependents 6 mentions 33 scripts 240 downloads

Last updated 12 months agofrom:ec8071082b. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 17 2024
R-4.5-winOKSep 17 2024
R-4.5-linuxOKSep 17 2024
R-4.4-winOKSep 17 2024
R-4.4-macOKSep 17 2024
R-4.3-winOKSep 17 2024
R-4.3-macOKSep 17 2024

Exports:CompParaSurvFitParaSurvGenDataNewtonRaphsonParaRMSTSurvFuncSurvLogLik

Dependencies:clicpp11dplyrexpintfansigenericsgluelifecyclemagrittrnumDerivpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr

Parametric Survival Analysis

Rendered fromTemporal.Rmdusingknitr::rmarkdownon Sep 17 2024.

Last update: 2021-07-20
Started: 2018-08-18

Readme and manuals

Help Manual

Help pageTopics
Check ArmCheckArm
Check DistributionCheckDist
Check InitializationCheckInit
Status CheckCheckStatus
Check ThetaCheckTheta
Compare Parametric Survival DistributionCompParaSurv
Contrast of Survival Distributions.contrast-class
Contrast LocationsContrastLocs
Contrast RMSTsContrastRMSTs
Set Default ParametersDefaultParam
DistributionsDistProperName
Difference of EstimatesEstDiff
Ratio of EstimatesEstRatio
Extract Observed EstimatesExtractObsEst
Fitted Survival Distributionfit-class
Exponential Distribution Parameter EstimationFitExp
Gamma Distribution Parameter EstimationFitGamma
Gamma Parameter Estimation without CensoringFitGammaComplete
Generalized Gamma Distribution Parameter EstimationFitGenGamma
Generalized Gamma Parameter Estimation without CensoringFitGenGammaComplete
Log-Normal Distribution Parameter EstimationFitLogNormal
Log-Normal Parameter Estimation without CensoringFitLogNormComplete
Fit Parametric Survival DistributionFitParaSurv
Weibull Distribution Parameter EstimationFitWeibull
Gamma Observed InformationGammaInfo
Gamma Profile Score for ShapeGammaScore
Data Generation with CensoringGenData
Generalized Gamma Observed InformationGenGammaObsInfo
Generalized Gamma Profile Log LikelihoodGenGammaProfileLogLik
Generalized Gamma Rate MLEGenGammaRate
Generalized Gamma Score EquationGenGammaScore
Generalized Gamma Shape MLEGenGammaShape
Log-Normal Observed InformationLogNormInfo
Log-Normal Score EquationLogNormScore
Newton Raphson EstimationNewtonRaphson
Newton Raphson Update IterationNRUpdate
Restricted Mean Survival TimeParaRMST
Permutation P ValuePermP
Print Method for a Contrast of Survival Distributions.print.contrast
Print Method for Fitted Survival Distributionsprint.fit
Quadratic FormQF
Quantile Function for the Weibull DistributionqWeibull
Simulation from the Gamma DistributionrGamma
Simulation from the Generalized Gamma DistributionrGenGamma
Simulation from the Log-Normal DistributionrLogNormal
Round Data FramesRoundDF
Simulation from the Weibull DistributionrWeibull
Show Method for a Contrast of Survival Distributions.show,contrast-method
Show Method for Fitted Survival Distributionsfit-method show,fit-method
Survival FunctionsSurvFunc
Log LikelihoodSurvLogLik
Weibull Information Matrix.WeiInfo
Weibull Initialization.WeiInit
Weibull Rate MLEWeiRate
Weibull Profile Score for ShapeWeiScore